Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850380.1_cds_XP_016511142.1_23913
CDS Infomation

[gene=LOC107828366] [db_xref=GeneID:107828366] [protein=splicing factor U2af large subunit A-like isoform X1] [protein_id=XP_016511142.1] [location=join(803..865,1610..1890,2156..2263,2902..2972,3591..3661,3741..3785,3938..3997,4600..4660,4747..4859,5235..5681,5783..5918,6029..6096,6406..6543)] [gbkey=CDS]
Sequence

ATGCAGGACTATGAAGGCAATGGAGTAGATATAGACAATAATGGCGCCTCTCCTTACAGT
CAGCATATTTCTCGTGACCATGAGAATGAAAGGGACTCATCAAGAAGCAGGGATAAGGAG
AGGGACAAAGGGCGTGATAAGGACAGGGACAGGGATAGGAATAGAGATAGAGACAGGGAC
AAAGTGAAGGAAAGGGACAAAGATAGGCATAGAGACAGAGATGGGGAGAAGGACCGTGAT
CGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGGAGAGGACCAGA
GATAGAGATGAAGATGATCTTCATCGAAGTCGAGATTATGATAGGCGAAGAGACAATGAC
AAAGATAGAGAGGATCGACGTAGACACAGGCCTAGCTCAAGGGGTAGATCTGAGCATAGA
TCAAAATCTCGATCACGGTCGCCATCCAAGAGCAAAAGGATCAGTGGTTTTGATATGGCG
CCTCCTACCAATGCGTTGTTACCAGGCGCTACTGATGTTGCAGGTCAAGTTCCTGGGACT
AACCCAGCAATTCCTGGACTGTTTTCTAACATATTTCCTTTAGCATCAAGCCAGTTTGGA
GCTCTCCCGATGATGCCAGTCCAGGCAATGACACAGCAGGCTACCAGACATGCTCGGCGA
GTTTATGTTGGTGGACTTCCTCCTACTGCAAATGAACAGTCTGTTGCTACCTTCTTTAGT
CATGTCATGTATGCAATTGGAGGAAACACTGCTGGTCCAGGGGATGCTGTTGTCAATGTT
TATATAAACCACGAGAAGAAGTTTGCTTTTGTTGAAATGAGATCTGTAGAGGAGGCTAGT
AACGCGATGGCTTTGGATGGTGTCATTTTTGAGGGCGGACCAGTTAAGGTTAGAAGACCC
AGTGATTACAATCCTTCGCTGGCTGCTACTCTTGGTCCTAGCCAACCGTGCCCTAACCTC
AACCTTGCAGCTGTCGGATTAACACCAGGTTCTTCGGGAGGGCTTGAAGGTCCTGATCGC
ATATTTGTTGGTGGTTTACCCTACTATTTTACAGAATCACAAATCAGGGAACTTTTAGAG
TCTTTTGGTCAACTTCGAGGATTTGATCTTGTCAAAGATAGAGAAACTGGGAACTCAAAA
GGCTATGCTTTTTGTGTGTACCAGGATGTGTCTGTTACTGATATTGCTTGTGCAGCGCTT
AATGGAATTAAGATGGGCGATAAAACTCTTACTGTTAGGCGTGCTAACCAGGGCACAACC
CAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAG
AGATTCATGTTACAACCTGGTGCATTAGCAACGAAGGTCTTGTGCTTGACTGAAGTGGTC
ACTGTGGATGAGCTCAATGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGACT
GAATGTGAGAAATTCGGAGCTCTAGTGAATGTTGTCATTCCACGTCCAAATCCTAATGGT
GTGCCTACACCTGGACTAGGAAAGGTATTTTTGGAGTATGCAGATGTTGACAGTTCCAGC
AAAGCTCGGCAAGGACTGAATGGAAGAAAATTCGGTGGTAACCAAGTTGTAGCTGTCTTC
TACCCGGAGAACAAGTTCTCTGAGGGAGACTATGAGGCTTAG

Peptide Sequence

PEP ID

XP_016511142.1
PEP Infomation

PREDICTED: splicing factor U2af large subunit A-like isoform X1 [Nicotiana tabacum]
Sequence

MQDYEGNGVDIDNNGASPYSQHISRDHENERDSSRSRDKERDKGRDKDRDRDRNRDRDRD
KVKERDKDRHRDRDGEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRSRDYDRRRDND
KDREDRRRHRPSSRGRSEHRSKSRSRSPSKSKRISGFDMAPPTNALLPGATDVAGQVPGT
NPAIPGLFSNIFPLASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS
HVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRP
SDYNPSLAATLGPSQPCPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLE
SFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTT
QPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRT
ECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVVAVF
YPENKFSEGDYEA

Transcript Sequence

Gene sequence data has not been registered.